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Greiner Bio vent cap
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Greiner Bio 96 well plate
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Greiner Bio 24 well plates co star
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Greiner Bio 6 well plates
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Greiner Bio 48 well suspension plates
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Greiner Bio well suspension culture plate
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Greiner Bio containers
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Beijing Solarbio Science dmem f12 culture medium
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Greiner Bio 96 well microplates
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Illumina Inc truseq custom amplicon low input
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Illumina Inc rapid capture expanded exome enrichment kit
Fig. 3 <t>Exome</t> and gene expression analysis. a <t>Whole-exome</t> <t>sequencing</t> showing somatic and loss of heterozygosity variants identified by referencing tumour cells to their matched stromal counterparts. b Summary of mutations in genes associated with HGSOC. c Hierarchical clustering and d principal component analysis of global gene expression profiles, distinguishing stromal and tumour clades, and showing the close relationship of tumour samples from the same patient. 69* is a stromal culture. Symbol colours in a and d serve to distinguish different OCM tumour samples. Source data for panels a and d are provided as a Source Data file.
Rapid Capture Expanded Exome Enrichment Kit, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 95/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Illumina Inc truseq amplicon cancer panel kit
Fig. 3 <t>Exome</t> and gene expression analysis. a <t>Whole-exome</t> <t>sequencing</t> showing somatic and loss of heterozygosity variants identified by referencing tumour cells to their matched stromal counterparts. b Summary of mutations in genes associated with HGSOC. c Hierarchical clustering and d principal component analysis of global gene expression profiles, distinguishing stromal and tumour clades, and showing the close relationship of tumour samples from the same patient. 69* is a stromal culture. Symbol colours in a and d serve to distinguish different OCM tumour samples. Source data for panels a and d are provided as a Source Data file.
Truseq Amplicon Cancer Panel Kit, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 95/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Fig. 3 Exome and gene expression analysis. a Whole-exome sequencing showing somatic and loss of heterozygosity variants identified by referencing tumour cells to their matched stromal counterparts. b Summary of mutations in genes associated with HGSOC. c Hierarchical clustering and d principal component analysis of global gene expression profiles, distinguishing stromal and tumour clades, and showing the close relationship of tumour samples from the same patient. 69* is a stromal culture. Symbol colours in a and d serve to distinguish different OCM tumour samples. Source data for panels a and d are provided as a Source Data file.

Journal: Nature communications

Article Title: A living biobank of ovarian cancer ex vivo models reveals profound mitotic heterogeneity.

doi: 10.1038/s41467-020-14551-2

Figure Lengend Snippet: Fig. 3 Exome and gene expression analysis. a Whole-exome sequencing showing somatic and loss of heterozygosity variants identified by referencing tumour cells to their matched stromal counterparts. b Summary of mutations in genes associated with HGSOC. c Hierarchical clustering and d principal component analysis of global gene expression profiles, distinguishing stromal and tumour clades, and showing the close relationship of tumour samples from the same patient. 69* is a stromal culture. Symbol colours in a and d serve to distinguish different OCM tumour samples. Source data for panels a and d are provided as a Source Data file.

Article Snippet: Indexed, paired-end, sequencing libraries were then prepared using the Nextera Rapid Capture Expanded Exome enrichment kit (Illumina, Inc.), designed to deliver 62Mb of expertly selected, expanded exonic content.

Techniques: Gene Expression, Sequencing